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Phytoliths preserved in soils and sediments can be used to provide unique insights into past vegetation dynamics in response to human and climate change. Phytoliths can reconstruct local vegetation in terrestrial soils where pollen grains typically decay, providing a range of markers (or lack thereof) that document past human activities. The ca. 6 million km²of Amazonian forests have relatively few baseline datasets documenting changes in phytolith representation across gradients of human disturbances. Here we show that phytolith assemblages vary on local scales across a gradient of (modern) human disturbance in tropical rainforests of Suriname. Detrended correspondence analysis showed that the phytolith assemblages found in managed landscapes (shifting cultivation and a garden), unmanaged forests, and abandoned reforesting sites were clearly distinguishable from intact forests and from each other. Our results highlight the sensitivity and potential of phytoliths to be used in reconstructing successional trajectories after site usage and abandonment. Percentages of specific phytolith morphotypes were also positively correlated with local palm abundances derived from UAV data, and with biomass estimated from MODIS satellite imagery. This baseline dataset provides an index of likely changes that can be observed at other sites that indicate past human activities and long-term forest recovery in Amazonia.

 

Oceanic islands support unique biotas but often lack ecological redundancy, so that the removal of a species can have a large effect on the ecosystem. The larger islands of the Galápagos Archipelago once had one or two species of giant tortoise that were the dominant herbivore. Using paleoecological techniques, we investigate the ecological cascade on highland ecosystems that resulted from whalers removing many thousands of tortoises from the lowlands. We hypothesize that the seasonal migration of a now-extinct tortoise species to the highlands was curtailed by decreased intraspecific competition. We find the trajectory of plant community dynamics changed within a decade of the first whaling vessels visiting the islands. Novel communities established, with a previously uncommon shrub, Miconia , replacing other shrubs of the genera Alternanthera and Acalypha . It was, however, the introduction of cattle and horses that caused the local extirpation of plant species, with the most extreme impacts being evident after c. 1930. This modified ecology is considered the natural state of the islands and has shaped subsequent conservation policy and practice. Restoration of El Junco Crater should emphasize exclusion of livestock, rewilding with tortoises, and expanding the ongoing plantings of Miconia to also include Acalypha and Alternanthera . 

Biodiversity contributes to the ecological and climatic stability of the Amazon Basin1,2, but is increasingly threatened by deforestation and fire3,4. Here we quantify these impacts over the past two decades using remote-sensing estimates of fire and deforestation and comprehensive range estimates of 11,514 plant species and 3,079 vertebrate species in the Amazon. Deforestation has led to large amounts of habitat loss, and fires further exacerbate this already substantial impact on Amazonian biodiversity. Since 2001, 103,079–189,755 km2 of Amazon rainforest has been impacted by fires, potentially impacting the ranges of 77.3–85.2% of species that are listed as threatened in this region5. The impacts of fire on the ranges of species in Amazonia could be as high as 64%, and greater impacts are typically associated with species that have restricted ranges. We find close associations between forest policy, fire-impacted forest area and their potential impacts on biodiversity. In Brazil, forest policies that were initiated in the mid-2000s corresponded to reduced rates of burning. However, relaxed enforcement of these policies in 2019 has seemingly begun to reverse this trend: approximately 4,253–10,343 km2 of forest has been impacted by fire, leading to some of the most severe potential impacts on biodiversity since 2009. These results highlight the critical role of policy enforcement in the preservation of biodiversity in the Amazon. 

Tropical forests are changing in composition and productivity, probably in response to changes in climate and disturbances. The responses to these multiple environmental drivers, and the mechanisms underlying the changes, remain largely unknown. Here, we use a functional trait approach on timescales of 10,000 years to assess how climate and disturbances influence the community‐mean adult height, leaf area, seed mass, and wood density for eight lowland and highland forest landscapes. To do so, we combine data of eight fossil pollen records with functional traits and proxies for climate (temperature, precipitation, and El Niño frequency) and disturbances (fire and general disturbances). We found that temperature and disturbances were the most important drivers of changes in functional composition. Increased water availability (high precipitation and low El Niño frequency) generally led to more acquisitive trait composition (large leaves and soft wood). In lowland forests, warmer climates decreased community‐mean height probably because of increased water stress, whereas in highland forests warmer climates increased height probably because of upslope migration of taller species. Disturbance increased the abundance of acquisitive, disturbance‐adapted taxa with small seeds for quick colonization of disturbed sites, large leaves for light capture, and soft wood to attain fast height growth. Fire had weak effects on lowland forests but led to more stress‐adapted taxa that are tall with fast life cycles and small seeds that can quickly colonize burned sites. Site‐specific analyses were largely in line with cross‐site analyses, except for varying site‐level effects of El Niño frequency and fire activity, possibly because regional patterns in El Niño are not a good predictor of local changes, and charcoal abundances do not reflect fire intensity or severity. With future global changes, tropical Amazonian and Andean forests may transition toward shorter, drought‐ and disturbance‐adapted forests in the lowlands but taller forests in the highlands.

 

Abrupt warming events recorded in Greenland ice cores known as Dansgaard-Oeschger (DO) interstadials are linked to changes in tropical circulation during the last glacial cycle. Corresponding variations in South American summer monsoon (SASM) strength are documented, most commonly, in isotopic records from speleothems, but less is known about how these changes affected precipitation and Andean glacier mass balance. Here we present a sediment record spanning the last ~50 ka from Lake Junín (Peru) in the tropical Andes that has sufficient chronologic precision to document abrupt climatic events on a centennial-millennial time scale. DO events involved the near-complete disappearance of glaciers below 4700 masl in the eastern Andean cordillera and major reductions in the level of Peru’s second largest lake. Our results reveal the magnitude of the hydroclimatic disruptions in the highest reaches of the Amazon Basin that were caused by a weakening of the SASM during abrupt arctic warming. Accentuated warming in the Arctic could lead to significant reductions in the precipitation-evaporation balance of the southern tropical Andes with deleterious effects on this densely populated region of South America.

 

To investigate cerrado responses to glacial–interglacial climate change and the potential for connective rain forest corridors between the Atlantic Coastal Forest and Amazonian rain forest.

The crater lake of Serra Negra (18 °S, 46 °W) in Minas Gerais, Brazil.

117 fossil pollen types, 22 non‐pollen palynomorphs were documented.

We recovered 7.82 m of sediment from the lake, and analysed fossil pollen at 62 depth intervals throughout the core. We derived a chronology based on radiocarbon dating with simple rate extrapolation to the base of the core.

The c. 90,000‐year fossil record showed a trend towards cooler climates at the Last Glacial Maximum (LGM), but interstadial warming coupled with reduced evaporative stress allowed the expansion of woodlands under cool, moist conditions. Cool‐adapted trees were most abundant between c. 67,000 and 48,000 years ago. A cool cerrado‐like environment marked full glacial conditions between c. 48,000 and 34,000 years ago. The peak of the LGM between c. 34,000 and 17,000 years ago is inferred to have been dry as no sediment accumulated in the system.

Expanded ranges of cold‐tolerant forest taxa led to establishment of a series of assemblages without modern analogue. A system characteristic of modern cerrado was rare in the history of this site. Multiple forest expansions were observed, each differing in composition. The periods of forest abundance at Serra Negra were not temporally aligned with forest expansion in the Atlantic Coastal Forest, and did not provide a continuous corridor of similar forest that connected the cerrado to the Atlantic Coastal Forest.

 

Ongoing and future anthropogenic climate change poses one of the greatest threats to biodiversity, affecting species distributions and ecological interactions. In the Amazon, climatic changes are expected to induce warming, disrupt precipitation patterns and of particular concern, to increase the intensity and frequency of droughts. Yet the response of ecosystems to intense warm, dry events is not well understood. In the Andes the mid‐Holocene dry event (MHDE),c. 9,000 to 4,000 years ago, was the warmest and driest period of the last 100,000 years which coincided with changes in evaporation and precipitation that caused lake levels to drop over most of tropical South America. This event probably approximates our near‐climatic future, and a critical question is:How much did vegetation change in response to this forcing?

Lake Pata, Brazilian Western Amazonia.

Terrestrial and aquatic plants.

We used pollen, charcoal, total organic carbon (TOC), total nitrogen (TN), δ¹³C and δ¹⁵N data from a new high‐resolution core that spans the lastc. 7,600 years history of Lake Pata.

We found that in the wettest section of Amazonia changes associated with the MHDE were detected in the geochemistry analysis but that vegetation changed very little in response to drought during the Holocene. This is the first high‐resolution core without apparent hiatuses that spans most of the Holocene (last 7,600 cal yrbp) from Lake Pata, Brazil. Changes in the organic geochemistry of sediments indicated that between c. 6,500 and 3,600 cal yrbplake levels dropped. Vegetation, however, showed little change as near‐modern forests were seen throughout the record, evidencing the substantial resilience of this system. Only a few species replacements and minor fluctuations in abundance were observed in the pollen record.

The mid‐Holocene warming and reduced precipitation had a limited impact on western Amazonian forests. We attribute much of the resilience to a lack of fire in this system, and that if human‐set fires were to be introduced, the forest destruction from that cause would override that induced by climate alone.